rs46474167 SNP Detail

Summary

• ID
  rs46474167
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:110975863 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGCAGAGCT CTGCGGTTAA
  AATAGAGCTC CTGTAGCCTG TTAAGCCAGA CCAAAGTTCA TCCTGGGAAC CAATGAGTTT
  ACTCGTCACT TACAGATGGA TGGTGACCCT AAAGCAGTAC ACATAGGAAG ATCAGCACCC
  AGCATGGACA ATGACTCCCT CATGGCCGTG TGCTGTAAAT ATTATCTTGG GGGATTTTAC
  T
  CTACTTAGAC CATACGGTTC CCAAATAAAA GACACAAATC TTTTAAGGCA TTAGAGCTGG
  ACAGGTATCA AGCCTCTGTG TTTGTCTATT CCCACTATTA CCTGCCATGT TACACCTGGA
  CTGTTCTCAT GGCCATGTGC GCCAACCTCA TGGCAATTCT TTCTCCCCAA GCCCTGGAGA
  CCTGAGGCCC CACCCATCTT                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss149056750	ENSMUSSNP4856450	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	A/J
rs46474167					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:110975863 () rs orientation: forward

Symbol	Name	Function Class
Hscb	HscB iron-sulfur cluster co-chaperone	1082 bp downstream
Rr616963	regulatory region 616963	480 bp distal
Rr616964	regulatory region 616964	within coordinates