rs46478175 SNP Detail

Summary

• ID
  rs46478175
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:149418066 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCAA AGGTCCTGAG TTCAATTCCC
  R
  GAAACCACAT GGTGGCTCAC AACCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss148031483	ENSMUSSNP348042	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs46478175					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149418066 () rs orientation: forward

Symbol	Name	Function Class
Tssr40324	transcription start site region 40324	1041 bp upstream
Ube4b	ubiquitination factor E4B	within coordinates
Ube4bos2	ubiquitination factor E4B, opposite strand 2	1030 bp upstream
Ube4bos3	ubiquitination factor E4B, opposite strand 3	1030 bp upstream