rs46482706 SNP Detail

Summary

• ID
  rs46482706
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:32610267 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTGGTAGTC TTGGCTAACA GAAAGAAGGA TATTAAGTAG
  ATGTTAAGTA GAGCTTTACC TGGCCCATCA GATTACACAG GACACCTGTG TCAAAGTTCA
  R
  CTATTCATGG CGTGGGTTCG AGTCCACGAC TGGGACCTTG GTCTTTATCA TAATGGTTTT
  TCTTTGTATT GCTTCGTTTC TCACAAGCAG AGACAAATA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss136249721	ENSMUSSNP960146	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46482706					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:32610267 () rs orientation: forward

Symbol	Name	Function Class
Ets1	E26 avian leukemia oncogene 1, 5' domain	within coordinates
Rr206170	regulatory region 206170	666 bp distal
Tssr84277	transcription start site region 84277	1960 bp downstream
Tssr84278	transcription start site region 84278	1032 bp downstream
Tssr84279	transcription start site region 84279	697 bp downstream
Tssr84280	transcription start site region 84280	439 bp upstream
Tssr84281	transcription start site region 84281	840 bp upstream
Tssr84282	transcription start site region 84282	919 bp upstream
Tssr84283	transcription start site region 84283	1299 bp upstream