rs46483781 SNP Detail

Summary

• ID
  rs46483781
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:50593580 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAAAA AGGAACGTCT CAATAAATAT
  R
  TTTAATTGGG AAGTAAAAAG ACTTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135164049	ENSMUSSNP4775007	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
ss320758963	CHEV_3_50443053	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46483781					SNP	G	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:50593580 () rs orientation: forward

Symbol	Name	Function Class
Rr576165	regulatory region 576165	773 bp proximal
Rr576166	regulatory region 576166	1777 bp proximal
Tssr33183	transcription start site region 33183	1703 bp upstream