rs46486377 SNP Detail

Summary

• ID
  rs46486377
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:185321430 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAGGGAGGA GCCCCTCTTG
  CAGCTAGCTA TGGGCATTCC AGGTAGACTA GTCATGAGGA CACTTGTGAG GGACAAGTGA
  GACAGACACA TGGGAAGAGA GCAGGACAGC AGGATGCACA AGGGTGGAGA TAAGTGGTTA
  TCTTTATTTA TTTATTTTTA ACTTCTTATT GATTCCTTGT AAGTTTCAAA TCATGTACCC
  M
  AATCTCACTC ATCTTCCCAT CCCCTCATAT TCACATTCAC CCCTTCTGCC CTTGCAAAAT
  AACACACACA CACACACACA CACACACACA CACACACACA CACACACACC CTAAGCATAG
  AAAACATCTC ATCATAGATG CTGTAGTATA CCACAGTATG TCCCACAGTA TACCACTCTG
  TCCACACATC ATCAATTGCA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320177580	CHEV_1_187413112	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs46486377					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185321430 () rs orientation: forward

Symbol	Name	Function Class
Rr425415	regulatory region 425415	516 bp distal