rs46495897 SNP Detail

Summary

• ID
  rs46495897
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:48916493 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTGAGAGGT TTCAACTAGG
  TGAGGGATCC CTTCCTCATC GTTTTCCTTG TCCCTTCATC ATACCCCAGG CAGATGATCC
  ATGAGGCAGG TGGCCCATCT CTGTCAGGTC ACTCTATGTC CCTGACTGCT TTGGGGAACT
  GCCTTTGCCC TCTGGGTCAC TGATGCTTTC TGTGGGGGCT GTAAAACAGA GCATGCGATC
  Y
  GTGAAGGACA CACCCAGGCA TCAACGACAT GGTTGCTCCT CACATCCTTG GGTTCTCGGC
  TACAGAACCA GCTGCACAAA GGCTTGGGAC TTGGTGCTCC ACCGACAACG GCGATAGTGT
  GGAATTCCAA AAGATGAAGG AGGGTTAGGT GCAAGAGACT GATGAGCAGA CGCTTTTACA
  GGTAACAGTT TCTAGATGAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss145720301	ENSMUSSNP5249204	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs46495897					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:48916493 () rs orientation: forward

Symbol	Name	Function Class
Cpgi9295	CpG island 9295	1597 bp proximal