rs46500524 SNP Detail

Summary

• ID
  rs46500524
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:32602454 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C ATGGGGAGGG TGGAAAAGAC TTCACAGAGA AATTATTTGA
  GTGTAAAATT CAAGCCATAC CTACAGGAAA ATCCTTTTTG AAGTTTGGAA TTGTTTTTAT
  W
  ACCAAAAAAA TAAAAAAATA AAAATCTGGG TAAGATCTGG CAGGATGAAG CCACCTGGAA
  CCCTAGTGAT AGCATAGAAT CCTGTGCCAT GGGGGTAAAA G                    
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss136249568	ENSMUSSNP1556807	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46500524					SNP	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:32602454 () rs orientation: forward

Symbol	Name	Function Class
Ets1	E26 avian leukemia oncogene 1, 5' domain	within coordinates
Rr199954	regulatory region 199954	947 bp proximal
Rr203547	regulatory region 203547	1641 bp proximal