rs46509933 SNP Detail

Summary

• ID
  rs46509933
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:70017998 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTACACATAT TCATTCACAT
  ATCACATACA CGACATACTA CACGTATGCA TCCACACACA CACCCAAGTT CCTATGTCAA
  TAATTATCAA TTTTGCTAAG AATTCAAGAG TAATGTTAGT GACAGGCATT TTTTTTAATA
  TCTTAGCATA TCTAGCTTCT AGAGTCACTT ACATATGGTG AATATGGGTG GAGAACCAGA
  Y
  TTTTCAAAAG TACCAATCCA AGTGTTTTGA TCTTGCATTT AATATAAGCA ATAAACTCCT
  CACTTTACCT TTTTTGGGGG GAATAACAGT TTAAAAATAT CATTTTTGGA AGGGGGAACC
  TCACTGTATA AAACATCCTG AATATTTTCC CCTTTCTTAT TCAAGGTTCT GCCCTCTTGA
  AATTCAACTT AAATTCTGGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss147391213	ENSMUSSNP4943262	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs46509933					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:70017998 () rs orientation: forward

Symbol	Name	Function Class
Gm50215	predicted gene, 50215	297 bp downstream