rs46513160 SNP Detail

Summary

• ID
  rs46513160
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:35017770 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CGCCG GCCATCGGAC CCGCACCTTC
  S
  TCCAGAGGCT CCAGGCCCGT TCCAT                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	C3H/HeJ	DBA/2J	KK/HlJ	LG/J	NZW/LacJ	SM/J	WSB/EiJ
ss60993439	NES16128383	PERLEGEN	MM_PANEL2	f	SNP	C	C	G		C		C		C
ss148806736	ENSMUSSNP266897	ENSEMBL	ENSEMBL_Sanger	f	SNP				C
ss322156919	CHEV_7_36103364	CHEVERUD	SCREENING_POP	f	SNP						C		C
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	C3H/HeJ	DBA/2J	KK/HlJ	LG/J	NZW/LacJ	SM/J	WSB/EiJ
rs46513160					SNP	C	C	G	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60993439	NES16128383	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:35017770 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18869	CpG island 18869	within coordinates
Gpatch1	G patch domain containing 1	within coordinates
Tssr72030	transcription start site region 72030	63 bp downstream