rs46516605 SNP Detail

Summary

• ID
  rs46516605
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:79294360 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C CAACACACTA GGTAACAAGC ACTTTGCAAA TCTATATGAG
  TGCCAGGCAC TGTGTTGTGA GGTATGTGTG TAGAAGGGTT ACAGAAGACT ATAGAATCAG
  C
  CAATAAACTT TTTTTTTTAA AGCTTTCTAT TCAGTTCATC TAATTGGCTC ATTTACAAAA
  GAGTCTTTGC TGACCAGCTA GAAGGGTGTA CAGGAAAGAA A                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss146785857	ENSMUSSNP4907452	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs46516605					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:79294360 () rs orientation: forward

Symbol	Name	Function Class
Rr559993	regulatory region 559993	1900 bp distal