rs46521260 SNP Detail

Summary

• ID
  rs46521260
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:14527542 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTCTCCTT CCAGATAAGT
  ATGCCGTTCG CTTCATCCCG CATGAGAATG GCATCCACAC GATCGATGTC AAGTTTAACG
  GGAGCCACGT GGTCGGGAGC CCTTTCAAAG TACGTGTAGG AGAGCCTGGC CAGGCAGGCA
  ATCCTGCTCT AGTGTCAGCC TACGGTGCTG GGCTTGAGAC GGGCACCACA GGTAAGAAGC
  G
  CTGCTTCCCT CGTTACCTGA GCAGCTCTCT CTGGGAGAGC TGAGGTAGAC ATCGTTAGCC
  CCTGGAGGCC TTCTGTGCTC TGTCCTTGGG AAAATGCAGA CCTGCGGGCT TTGGAGGAAT
  TGGGGGCCAT TGTTTGAACC GGGGTAAATC CAGACAGAGG CCTGTATTGT TATACCTCAT
  TACAGTTTGT TTGTAGCCCA                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss138984446	ENSMUSSNP5200534	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46521260					SNP	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:14527542 () rs orientation: forward

Symbol	Name	Function Class
Flnb	filamin, beta	within coordinates
Gm62553	predicted gene, 62553	within coordinates
Rr487922	regulatory region 487922	913 bp distal
Rr487923	regulatory region 487923	436 bp proximal
Tssr124220	transcription start site region 124220	572 bp downstream