rs46525205 SNP Detail

Summary

• ID
  rs46525205
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:142451679 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATTT GCCACGGCTC CTGAATCCAC
  Y
  CAGGCTCTGA TCGTATCTCT CCTCA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss136017205	ENSMUSSNP4296270	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs46525205					SNP	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:142451679 () rs orientation: forward

Symbol	Name	Function Class
Gm15540	predicted gene 15540	within coordinates
Kyat3	kynurenine aminotransferase 3	mRNA-UTR
Rr398091	regulatory region 398091	1620 bp downstream
Rr586476	regulatory region 586476	1228 bp distal
Rr586477	regulatory region 586477	1729 bp distal
Rr586478	regulatory region 586478	727 bp distal
Rr586479	regulatory region 586479	1818 bp proximal