rs46526704 SNP Detail

Summary

• ID
  rs46526704
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:119132861 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTAAAGAGTA AAGAAAATGG
  TGGCAGATGC CTTTAATCCG AGTACTCAGG AAACGGAGGC AGAAGGCTCT CTGAGTTTGA
  GGCCAGCCTG GCCTCCATAT TGAATTCGAG GACAGCAGGA CTAAATGGAG AGACCTTGTC
  TCACAAATAA ATAAATAAAT ATAAAAATAA AGGCATATGT CACTATGCCT AGCAGATTTT
  M
  CATTTTTGTA CACCTTTGCA AATGTTATTA CACTAGTTAA AGTGTTTGTT TGATAATTTA
  ATAGACAAAA TGCCTTGGTT CATGTTTAAT TTTGCCAAGG AAATCAACCC TTTTAAATAC
  ATTTATTTGC TCTGCATGCT AATATTGTTT GTTCACTTAT GCAAAGGATT CTTTGTGCTT
  CATCTATTTC AAGGAATCGT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52237594	NES15333921	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	A	C	C	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs46526704					SNP	C	C	C	C	C	C	C	C	C	C	A	C	C	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52237594	NES15333921	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:119132861 () rs orientation: forward

Symbol	Name	Function Class
Gm67006	predicted gene, 67006	within coordinates
Rr439864	regulatory region 439864	1901 bp distal
Rr439865	regulatory region 439865	1973 bp distal
Rr439866	regulatory region 439866	833 bp distal
Tssr99523	transcription start site region 99523	1734 bp downstream