rs46529467 SNP Detail

Summary

• ID
  rs46529467
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:144076579 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AATGTCAGTT CAAAAGGCCT TATTTGGAAT TAGAAATTAG
  CCATCCTCCC TTAAGAGGCA AGTTGCGAGA GGAGCAGCAG TGCATCTGTG TCAGGAAACA
  Y
  TACTCTGCAA TAAGAAGAAA GGGACTATTG ACAGCCTGGA AGGAAGGAAG GCTCTTCAGA
  GAATTACACT AAGTGGAGGA AAAAAAAAAA AAAAAACAG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147788191	ENSMUSSNP426251	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46529467					SNP	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:144076579 () rs orientation: forward

Symbol	Name	Function Class
Gm75267	predicted gene, 75267	within coordinates
Rr397360	regulatory region 397360	809 bp downstream
Rr566413	regulatory region 566413	795 bp distal