rs46534565 SNP Detail

Summary

• ID
  rs46534565
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:32575819 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGAGA TAAACAAAGA ATACTTTTTT
  A
  AAAAAAAATT ATTATCTGTA AGTAT                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss148200830	ENSMUSSNP2518584	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss321505236	CHEV_5_32720848	CHEVERUD	SCREENING_POP	f	SNP			A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs46534565					SNP	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:32575819 () rs orientation: forward

Symbol	Name	Function Class
D5Mit334	DNA segment, Chr 5, Massachusetts Institute of Technology 334	676 bp distal
Gm5864	predicted gene 5864	1528 bp upstream
Rr609358	regulatory region 609358	1168 bp distal