rs46543019 SNP Detail

Summary

• ID
  rs46543019
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:45027555 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACATTTCCA GCCTTCTCAG
  CTGCCTCGTG CTCCCCACCT TAGCCATGTA ACATTTACCT TCTGAGGAGT GAGCTCACCT
  TCCTTGTCTC TGTACCTTCT ACTTCCCTGT CAGTCTCAAA GCACCAACTC AGACCCTGCC
  CTGCTCATCA CACTATAGCA CGCTCCAACG AACTGTTAGA GGCCATCAGT ACCTCCCCAA
  Y
  TGTTCAAAGA AAGCACTACC ACACCTCCCC AGATTCTGAT GTGCCACGAA TACTTCAAAC
  TTGCAGATTC AATACGTGGT CTATAAAGGT GATTTTCACC CAACCAATAG CACAAGGGAG
  CAGGTGACAG TCTTATCTTT CAGACAGGGA TCTACTAATG AGCCACTTGC CCCAGTGACT
  TGGCAAGGAG GGTCATGTCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss149134246	ENSMUSSNP3470584	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs46543019					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:45027555 () rs orientation: forward

Symbol	Name	Function Class
Snrnp70	small nuclear ribonucleoprotein 70 (U1)	within coordinates
Tssr66520	transcription start site region 66520	934 bp downstream