rs46543702 SNP Detail

Summary

• ID
  rs46543702
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:76792420 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATCTTTTTC TGCAATCTAA
  ATGTATGTGT CCCCAGAAGT CCTTCATTAA AATCCTATCT CTGAGATCCT GGCATTAGGA
  GGTAAGGACT TTAAGAAATG ACTGAAGGCT AAGCCTTTGT GAATGGGGCT AGTGCCTTCA
  TAAGGGAAGT TTGAGGGAGC TCAGTCACTC CTGATAAACT AGGACACAAC TTTGAAGAAG
  R
  AGGGGAGCCT AAACAGTCAC AGGATCTACT ACCAGCATCT TCATTTGGAA CTTCCTGGTA
  TCTAGCAGAG TATGAAAAAA TAACTGGCTA TTTCTAATCA CAGGATTTAT ATTATCTAAT
  TATATTATTT TGAATAGACC TAGTTTACTT CTCCTCTGTA CATTTTCTCC CATCATCAAA
  ATTTCTTATT AATTGATTAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss144717348	ENSMUSSNP3768129	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46543702					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:76792420 () rs orientation: forward

Symbol	Name	Function Class
Gm70762	predicted gene, 70762	within coordinates