rs46547098 SNP Detail

Summary

• ID
  rs46547098
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:61806066 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TATAT TGTTTATTAT ATGGAGAGAT
  K
  TTTATTAACT ATTCCCTGTT AAGGG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss146432794	ENSMUSSNP3715202	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss321142054	CHEV_4_61548863	CHEVERUD	SCREENING_POP	f	SNP			G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs46547098					SNP	G	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:61806066 () rs orientation: forward

Symbol	Name	Function Class
Rr376581	regulatory region 376581	within coordinates