rs46563899 SNP Detail

Summary

• ID
  rs46563899
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:57167760 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G CTGTATGAAT GGAGGACTAG GACAGAGTCC TCTCTGGTGG
  AGCGGCCAAA ACTGGTGGAA CCCCCTGAGC TGGTGCAAGA GTATGAGATC AACTGAAGCA
  A
  CTTTGGGGTG GAGGCTGTTT CCGACTCTGG CATCTCTGCT AAGAGCACTG GAATAGACTG
  GGGTATCTCC CTGGAGTCTG AGTCCAAGGA TGCTGGGGCC A                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147119747	ENSMUSSNP1685791	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs46563899					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:57167760 () rs orientation: forward

Symbol	Name	Function Class
Gm7001	predicted gene 7001	within coordinates
Gm66529	predicted gene, 66529	738 bp upstream