rs46568359 SNP Detail

Summary

• ID
  rs46568359
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:156958809 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATTTTCATT TGGTTGGCTG
  TTTTTTTGAG ACAGAGTCTC ACTATGTAGC TCTGGTTGGC CAGGAACTTG CTATATAGAC
  AAGGCTGGCC TTGAACTCAC AGAGATCCAC CTGTCTCTGC CTTCTGAGTG CTGGAATTAA
  AGGGGTGCAT CATCACGCCC TGTCACAAAC AACTTTTATT AGTCTTTAAA ATGCACAACG
  R
  GAGGAGTCTC ACTGAAGCGC TCTCAGATTC TCTCTTACTG ACCCCCCCGC TCTACACCAC
  CATTATATAC CAGTTTATTA TTCCATAAAT ACAATGAATA ACACTTTATA AAATATAATA
  ATTCACATTA CCAAGGAGAT TATTACCAGA TCATATCGGT AGAATGACTA TCATTCTAAA
  ATTTAGGGTT TTTTTCCCCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss148092287	ENSMUSSNP7063	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs46568359					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:156958809 () rs orientation: forward

Symbol	Name	Function Class
Rr568435	regulatory region 568435	1929 bp distal
Rr568436	regulatory region 568436	65 bp proximal
Rr568437	regulatory region 568437	238 bp proximal
Rr568438	regulatory region 568438	639 bp proximal
Samhd1	SAM domain and HD domain, 1	Intron