rs46569068 SNP Detail

Summary

• ID
  rs46569068
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:80071764 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTGAGCCA AAGAGTCTGA
  GAACACCAAC CTGGTGAGAC ATTGTTTCAA AGTTCATGGG AGGGATTGAA AGTGTGGCCT
  TCAGTGGTGG CGTTTGTCCT TGGTTTTGCA GGGAACAATA CTGACCAAAG GAGATACTAG
  GATAAAAGTA TTTACCAAAC CAGAACAGAT ACAAAAAAGA TTACATAAAA CGTTGCAAAA
  R
  AGCCTGGAGG TAGTGGTGGT GCCTGCCTCT AATTCCAGCA CTCCCGGAGG CAGAGGCTGG
  CCGATCTCTG TGTATTTGAG ATCAGACTGG TCTACAGGTC TACTTCTAGG ACAGCCAGGC
  TTACACAGAG ATGGAGAATT CTCAGAGAGA ACAACTATGC TGCCCAAGGA AAGGAAGTTT
  CTCCATTACA AGGGGACTTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss132448925	ENSMUSSNP966128	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs46569068					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:80071764 () rs orientation: forward

Symbol	Name	Function Class
Adap2	ArfGAP with dual PH domains 2	1980 bp downstream
D11Bhm113	DNA segment, Chr 11, Boehm 113	49 bp proximal
Rr386348	regulatory region 386348	within coordinates
Rr452448	regulatory region 452448	1087 bp distal
Rr452449	regulatory region 452449	625 bp proximal
Tssr103506	transcription start site region 103506	1764 bp downstream
Tssr103507	transcription start site region 103507	1603 bp downstream
Tssr103508	transcription start site region 103508	1570 bp downstream