rs46574659 SNP Detail

Summary

• ID
  rs46574659
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:143971726 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAAATCCTA CTGTTTCTTA
  CTTGGACTAC TCACAGCACA TGCCAACAAG CTGTGGTCTA TCCACAAACA CAACTCTTCT
  AATAGACACA TTAAGGAATT CTTACACAAT TGGGGTGGCT GCAACACAAG TAGAAAAGTC
  TTCCTAATAC AAACCATCAA AGTACACATA TGTAAAACAG AATTGTGATC CTCTAGGGCA
  Y
  TCTAGCTATA AGGTCACCAA GGTGCTGCAA TGCTATGACT TATTTCTTCT CACCTCTGCT
  TTACTCTGCA TTGGTTTTAG TTGAGGCAGA GAGTCTCATC CTGTGTAGGA CAGGAAGCTA
  CCAGCAGCTT CAAGTGTACA AGGACCTTTT TTTACCAAGG AAACCTAGAA AAACAGATAC
  CCTTGTGGTT CCCAGAGAGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss136029562	ENSMUSSNP628228	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs46574659					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:143971726 () rs orientation: forward

Symbol	Name	Function Class
Rr74711	regulatory region 74711	967 bp distal
Rr74712	regulatory region 74712	749 bp proximal