rs46579430 SNP Detail

Summary

• ID
  rs46579430
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:71045286 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCATTTCTT TTAAATTATT
  GGTTTATGTT AGATGAATGT GCACATTAAA GTCTCCATTT CTAAATGCTT ATTGTCCCTT
  TGGACTTGTT AAAGGATCTG ACTGTTCCTG CAGTTGCAGG TGTCTCTTGC TGGCACCACA
  CCATGTGTTT GTATTACCAG GACACCAGCT GTGCAGGCTG CAGATCACAT CCTTAGATGC
  W
  GAACCCAGAG AAGGAATAGT AACATTTCTT GGATGAAAAC CTAATACTGA GATATTCTTT
  TCACTAGTAC TCTTTTCCTG CAAATATGCC ATTATCTGAC TGAAGTACCG GTCATGACCA
  CTGTCCATGC TGCTTGTCCT CTGGAGGAGC CAAGTTGAGA ACCTCAGTTA TGGAGGCTGC
  TTCTGTGCAT TTTTGCTGTT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss132382724	ENSMUSSNP4347021	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss323739620	CHEV_11_70967962	CHEVERUD	SCREENING_POP	f	SNP			T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs46579430					SNP	A	A	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:71045286 () rs orientation: forward

Symbol	Name	Function Class
Nlrp1b	NLR family, pyrin domain containing 1B	within coordinates