rs46579970 SNP Detail

Summary

• ID
  rs46579970
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:70118673 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGGCGTGCA CCACCACATC
  TGGCTACAGA ACCGATTTAT AACTTAGAGA TCTGGTAGAC AGTCGATCAA GGGGAAGATA
  GGTTCCTTCG GGTGGGGACT GGTATGTATT TAGTAAGTCT GGAATGCATT TGGAATGTTT
  TCTGGGAAGT CAATTTAGTT CATTTATTGA TTATCAGATT CTAGAAGTCC CCTGGCCAGA
  R
  CAACACAATT CAGCTAAACT GGAGAGGGTT AGACTTGATG GCCGTGGGAA GGTTAAGGAA
  AAGCTAGTTC AGGATACTAC TACCTTGGGG TGCGGTGCGG TGGGCCAGCC CAGGGCATCC
  TCTCTTGGAA GAGAAGCCCA TCAGGCACTG GATAGACAGA GAGGAGGCAA TGGGAAGGTG
  AAAGTCGTCC CACCCCCATC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss136604720	ENSMUSSNP2568677	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46579970					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:70118673 () rs orientation: forward

Symbol	Name	Function Class
Gm26849	predicted gene, 26849	within coordinates
Gm68934	predicted gene, 68934	within coordinates
Myo1e	myosin IE	within coordinates
Rr206677	regulatory region 206677	1872 bp distal
Rr206678	regulatory region 206678	1472 bp distal
Tssr85881	transcription start site region 85881	1820 bp upstream
Tssr90403	transcription start site region 90403	330 bp downstream