rs46581094 SNP Detail

Summary

• ID
  rs46581094
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:21296211 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCCT TGGCTTAATA TTTAGAAATG
  Y
  CTTATTAGTA TACTCATCAA CACGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss146945195	ENSMUSSNP6445179	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
ss323268457	CHEV_10_21140118	CHEVERUD	SCREENING_POP	f	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs46581094					SNP	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:21296211 () rs orientation: forward

Symbol	Name	Function Class
1700021A07Rik	RIKEN cDNA 1700021A07 gene	within coordinates
Cpgi1360	CpG island 1360	770 bp distal
Rr214085	regulatory region 214085	590 bp proximal
Rr224569	regulatory region 224569	810 bp distal
Rr368955	regulatory region 368955	920 bp downstream
Tssr92636	transcription start site region 92636	852 bp downstream
Tssr92637	transcription start site region 92637	831 bp downstream