rs46582450 SNP Detail

Summary

• ID
  rs46582450
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:79313842 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGTTCTGAA CGTGTTAGCT
  TAGGCAACCA GCTTAAAATA TGCTCTGATT AGTTCTGAAT TATTCAGCGC TAATCAGGTA
  CTCCTTCAAG TCATCTCTTC TGTGTTGCGG GTCTCCAAAG TCACAAAATG CTTCTGAATA
  AAATAATCCC AAAGTGAAAA CGTGAACTTG ACTCTATCTT CAGTTTATCA AACAAGAAGT
  S
  TGCTTCACGT GTGAAGACCT GAAAATGGCA GTCTAGAAAG ACAAAGGAAC AATTTTATAA
  AGACAGATGC AATCTATCTC AGGGTAGAAT TCTGTCTGTT TAAAATGGTA GCTTATAAGC
  TACAGTGCTT GAAGACAGTG TTGCTGCTGA TGGGATATGG GAGCAATACC ATGTTTCAGG
  AAGGTCAGAG CACAGTAGGT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss144772774	ENSMUSSNP226956	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46582450					SNP	G	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:79313842 () rs orientation: forward

Symbol	Name	Function Class
Gm70347	predicted gene, 70347	within coordinates
Tssr129	transcription start site region 129	1091 bp downstream