rs46583749 SNP Detail

Summary

• ID
  rs46583749
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:92701386 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTACTTTTA CTTATGTCTG
  TCTGTCCTGG TTCTCCTTAA GTCTTAGAAA CCCAACCCAA ATTTAACCAG CTTTTATAGA
  ATTCCTTGAA AGTTCCCAGG CACTGTGGCC TGAATATTTA TGCCTTGCCC CCCCTTTTTA
  GATTTATTTA TTATTATACA TAAGTATACT GTAGCTGTCT TCAGACGCAC TAGAAGAGGG
  Y
  ATAGCGTCAG ATCTCATTAA AGGGTGGTTA TGACCCATCC TGTGGTTTCT GGGATTTGAA
  CTCAGGACCT TTGGAAGAGC AGTCAGTGTT CTTGCCCACT GAGCCATCTC TCCAGCCCTG
  CCTTGCCCTT TTAATATGTT GAAATCTTAA TCCTAACACC CAGGACATGG TATTAAGAAC
  ACCATTTAGG GCTGGAGAGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss148834726	ENSMUSSNP3269352	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs46583749					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:92701386 () rs orientation: forward

Symbol	Name	Function Class
Fam47e	family with sequence similarity 47, member E	1542 bp upstream
Tssr47317	transcription start site region 47317	1508 bp upstream