rs46584235 SNP Detail

Summary

• ID
  rs46584235
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:18997709 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGCACTGTAT ATATAGACCA GGTTGGCCTC GAACTCAGAG
  ATCCACCTGC CTCTGCCTCT TGAGTGCTGG GACTAAAGGC ATGAACTACC ACACTGGCTG
  Y
  GTTTTGTTTT TGTTTTTTAA AATTTCATAT GTATGGGTGT TTTGCCTATA CATGTATTTC
  TGTGTACCAC ATATGTGCCA AGTGCCCACA AAGGCCAGA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss148471772	ENSMUSSNP4723643	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
ss322116781	CHEV_7_19849133	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46584235					SNP	C	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:18997709 () rs orientation: forward

Symbol	Name	Function Class
Rr167144	regulatory region 167144	1091 bp proximal
Tssr70882	transcription start site region 70882	1725 bp upstream
Tssr70883	transcription start site region 70883	685 bp downstream
Tssr70884	transcription start site region 70884	1026 bp downstream
Vasp	vasodilator-stimulated phosphoprotein	within coordinates