GACAA GGTAGGGAAG GAGTGTGAGC K GCTGTCTCGG TCACGCCTGG GGTGG K = G/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | A/J |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|
ss148699878 | ENSMUSSNP4304858 | ENSEMBL | ENSEMBL_Sanger | f | SNP | G | G | ||
ss322139424 | CHEV_7_31898990 | CHEVERUD | SCREENING_POP | f | SNP | T | G | ||
SNP Consensus Information | |||||||||
SNP | Consensus Type | A/J |
DBA/2J |
LG/J |
SM/J |
||||
rs46585986 | SNP | G | G | T | G |
Location: Chr7:30813396 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cpgi18835 | CpG island 18835 | 1964 bp proximal | ||||||
Hpn | hepsin | within coordinates | ||||||
Rr645021 | regulatory region 645021 | within coordinates | ||||||
Rr645022 | regulatory region 645022 | 1301 bp proximal | ||||||
Tssr71932 | transcription start site region 71932 | 729 bp downstream | ||||||
Tssr71933 | transcription start site region 71933 | 1256 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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