rs46586598 SNP Detail

Summary

• ID
  rs46586598
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:14527783 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGTGGATTG TGAGGCAGGA
  GCCTGAGTCT ATAACAGAAC TCGAGAGTCA AGAGTGTTTC CCAAAGGGCT GATTAGGGAG
  ACACAAAGTA AGGCTAGCTG GCCTTAAAAT CTGTGTGTTA GCTGCCAGGC TCCCAGCAGA
  ATGGTGTCTT TAAATGATTC AGCGCTGCCC AGCTCAGGTT GCTTGCAATG CTGTGTCCCC
  A
  CTCACACCAC ACTGCTTAGC ATCCACGTTT ACCATGTGCA TCTTCTCCTT CCAGATAAGT
  ATGCCGTTCG CTTCATCCCG CATGAGAATG GCATCCACAC GATCGATGTC AAGTTTAACG
  GGAGCCACGT GGTCGGGAGC CCTTTCAAAG TACGTGTAGG AGAGCCTGGC CAGGCAGGCA
  ATCCTGCTCT AGTGTCAGCC                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss138984428	ENSMUSSNP4274576	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs46586598					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:14527783 () rs orientation: forward

Symbol	Name	Function Class
Flnb	filamin, beta	within coordinates
Gm62553	predicted gene, 62553	within coordinates
Rr487922	regulatory region 487922	1154 bp distal
Rr487923	regulatory region 487923	195 bp proximal
Tssr124220	transcription start site region 124220	331 bp downstream