rs46600302 SNP Detail

Summary

• ID
  rs46600302
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:68257474 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGATCTGTTA TTGACTTTGG
  ACCATTGTGA TTAGGCTAGT CTAGCTAACC AATTAATCCC TGGGTCTCCA ATGTTGGGAA
  TACTATTACA TATAACCAGG CCTGGCTTTT TCATGTGGAT CAGAGGACTG AGTCCACTCT
  GGTTTTTCAC TGTTGTGTAG CAATCACTTT AGTAACAGGG TCTTTTCTCT GGACTGATTT
  W
  AAATATGTAC TCAAATTTCC CATTGAACCT CATAAACCCT CCGACATATA TGACAATTTT
  TATGCCCATT TAAAGGAAAA GAGGCTGATT TTGTTATGTG TCTATGTGTC TAATCTCTTA
  AACATAAAGA TTGATTACAT CTAATATGAA TTGACAGTGA GAGAGAGAGA GAGAGAGAGA
  GAGAGAGAGA GAGAGAGAGA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146487422	ENSMUSSNP4061633	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46600302					SNP	T	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:68257474 () rs orientation: forward

Symbol	Name	Function Class
Rr376643	regulatory region 376643	1833 bp upstream