rs46600632 SNP Detail

Summary

• ID
  rs46600632
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:23475683 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTGA AAAGATCCCA AGGGTCTATG
  C
  ATTTCAGGGT CCCCAACTGC AGAAT                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss147318321	ENSMUSSNP809677	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss324891328	CHEV_15_23405352	CHEVERUD	SCREENING_POP	f	SNP			C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs46600632					SNP	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:23475683 () rs orientation: forward

Symbol	Name	Function Class
Cdh18	cadherin 18	1179 bp downstream
Cpgi6966	CpG island 6966	1377 bp distal
Gm56739	predicted gene, 56739	862 bp downstream
Tssr130794	transcription start site region 130794	1139 bp downstream