rs46602883 SNP Detail

Summary

• ID
  rs46602883
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:41274996 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G TATTTTCCTC ATTTACATTT TCAATGCTAT CCCAAAGGTC
  CACCATACCC ACCCTCCCAA TCCCCTACCC ACCCACTCCC CCTTTTTGGC CCTGGTGTTC
  Y
  CCTGTACTGG GGCATATAAA GTTTGCAAGT CCAATGGGCC TCTCTTTGCA GTGATGGCCG
  ACTAGGCCAA CTTTTGATAC ATATGCAGCT AAAGACAAGA G                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss145187085	ENSMUSSNP4865337	ENSEMBL	ENSEMBL_Sanger	r	SNP		G
ss148131270	ENSMUSSNP6606023	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs46602883					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:41274996 () rs orientation: forward

Symbol	Name	Function Class
D2Dcr134	DNA Segment, Chr 2, Derry C. Roopenian 134	863 bp distal
Lrp1b	low density lipoprotein-related protein 1B	within coordinates
Rr556252	regulatory region 556252	1965 bp distal