rs46602919 SNP Detail

Summary

• ID
  rs46602919
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:40504183 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                      C AGGAAGTGGC TGAGAGTTCT ACATCTTGTT TCTAAGGCAA
  ACAGGAGAAG ACTGACTTTC AGGCAGCTAG GACAAGGGTC TTAAAGCCTA CACCCACAGT
  A
  ACAGAACTCC TGCAACAAGG CTTACACCTA TTCCAACAAG TCCTCACCTC CAAATAGTGC
  CACTCCCTGG GCCAAACATA CTCAAAAGAC CACACTGCTA C                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146580077	ENSMUSSNP402602	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46602919					SNP	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:40504183 () rs orientation: reverse

Symbol	Name	Function Class
Ddo	D-aspartate oxidase	1824 bp upstream
Rr214674	regulatory region 214674	818 bp proximal
Rr224698	regulatory region 224698	1417 bp proximal
Tssr93026	transcription start site region 93026	1800 bp upstream
Tssr93027	transcription start site region 93027	1870 bp upstream