rs46603929 SNP Detail

Summary

• ID
  rs46603929
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:164147293 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCCCGAATA TAAAACCTCA
  AATCGGAAAT CTCTTACAAT GAAGCGTAGG TCTACAGCTC TGCAGTATTG TGTCAAGCAA
  AGCTTTCTCG AATATGACAT CAAAACCACA AGTCACCACC ATTCCCGTCC CCTTGCCGGT
  GAAGTGTTCT AGAACGGCAA GTGTGAGCCA GGGGGGCTTC TGGAGCACCG CGCCTAGATC
  C
  TAGCTGGACA CAGGGAAGGA TATCTGCGGG GAGGAAGCAG GATAAGGGCT GAATTACAAA
  GGTGTGGGCA GATAGAGAAA CTGACAAGGA GCTGCAGGCA TCAGGAGGAG GGACTGGCAA
  GAGCAGAGAG CTTATCAGGG TGCAAGAGAA CTGCCAGAGA CTGGCTAGTG TCTGACAGGA
  GCTGTGGCTT CAGCGGAGCT                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145976388	ENSMUSSNP6967585	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46603929					SNP	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:164147293 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Nme7	NME/NM23 family member 7			Intron
				Noncoding-Transcript-Variant
Rr422185	regulatory region 422185			within coordinates
Rr422186	regulatory region 422186			1018 bp proximal
Rr422187	regulatory region 422187			1570 bp proximal