rs46607849 SNP Detail

Summary

• ID
  rs46607849
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:31057894 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGTC CAAGCCTTTT ACATACAAGT
  Y
  AACAAATGAC ATCCCAGATA AAAAC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	CAST/EiJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J	WSB/EiJ
ss60590096	NES16330949	PERLEGEN	MM_PANEL2	f	SNP		C		T	T		C
ss148943869	ENSMUSSNP5562308	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
ss322545320	CHEV_8_31678338	CHEVERUD	SCREENING_POP	f	SNP			T			C
SNP Consensus Information
SNP					Consensus Type	A/J	CAST/EiJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J	WSB/EiJ
rs46607849					SNP	C	C	T	T	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60590096	NES16330949	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:31057894 () rs orientation: forward

Symbol	Name	Function Class
4933433F19Rik	RIKEN cDNA 4933433F19 gene	529 bp upstream
Gm63720	predicted gene, 63720	within coordinates