rs46608544 SNP Detail

Summary

• ID
  rs46608544
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:74591495 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTGTGGTTC CCTCTTGTCA
  GATATCTTTA GCTTGTATCA ACTTAACAAA AAAGCCACAA CCATAACAAA TACATTTCTG
  GCAAATGAAT ATTCATTACT TCAGTCTGAG ATTTGGAATC CATTTGAATA TTATCCCTGC
  CTCCCATACC AGGTTGTGGT GCCTCACTGG CACCTTTATT TTCTTGTCAT AGAATTCATA
  Y
  TCTTTCTTCA ACCTTTTAAA AAGCAGAATA AATAGTTCAA CCTTATCTTA GAATTCTCAG
  TGAAGATGTT CCTCAGTTTT AAAATGTCAT AGTGGAAAGT TTCAACTACA CAGAAGTATA
  TTGACGAGTA GACCAGTCTC TAGAATTATC AGCATTTTGT TAATCTTGGC CAGCTACCTT
  AGGGGTCATC AAGTGTTCCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss139742218	ENSMUSSNP129055	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46608544					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:74591495 () rs orientation: forward

Symbol	Name	Function Class
4933402J15Rik	RIKEN cDNA 4933402J15 gene	1472 bp upstream
Gm49171	predicted gene, 49171	within coordinates