rs46611792 SNP Detail

Summary

• ID
  rs46611792
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:134805015 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGCCT GGCAACAAAT GCCTTTACCT
  R
  CTGAGCCCTA CCTCTCTGGT CCCTA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss133787565	ENSMUSSNP6705184	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss321982527	CHEV_6_134778070	CHEVERUD	SCREENING_POP	f	SNP		G	A
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs46611792					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:134805015 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18077	CpG island 18077	1877 bp proximal
Gm67917	predicted gene, 67917	889 bp downstream
Rr368197	regulatory region 368197	1833 bp upstream
Rr639725	regulatory region 639725	1624 bp distal
Rr639726	regulatory region 639726	363 bp proximal
Rr639727	regulatory region 639727	453 bp proximal
Rr639728	regulatory region 639728	994 bp proximal