rs46612728 SNP Detail

Summary

• ID
  rs46612728
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:23006092 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                      G GGGAGGTTGA AAACCAGTTT TGGTAGTTCA CCTTTCCCCT
  AGGCCATTGT AAATACTTGT GTATGGGTGT AACTCAGCTA TCTACAGTTC TAAGTATCTA
  Y
  TCTTGTTCCT CTTTAGGTCT AAAACTTCCT TTTTCCTAGT TGATGCTAAA TTCCTGTGTA
  AGGCAGTGAC CTAGCTTTTA TTAAAGTGAT AGTGTAATGC C                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	MSM/Ms
ss147806923	ENSMUSSNP1870451	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	DBA/2J	MSM/Ms
rs46612728					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:23006092 () rs orientation: reverse

Symbol	Name	Function Class
Rr285916	regulatory region 285916	within coordinates
Rr285917	regulatory region 285917	766 bp proximal