rs46621115 SNP Detail

Summary

• ID
  rs46621115
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:35016888 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCAT TCCTGCCCAC CCCCCAAGGA
  R
  ACTACTCTCA AAATTAAAGC AAACA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148806708	ENSMUSSNP4771725	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46621115					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:35016888 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18869	CpG island 18869	604 bp proximal
Gpatch1	G patch domain containing 1	within coordinates
Rr645358	regulatory region 645358	965 bp proximal
Rr645359	regulatory region 645359	967 bp proximal
Tssr72030	transcription start site region 72030	945 bp downstream