rs46636222 SNP Detail

Summary

• ID
  rs46636222
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:70730842 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAACA TGGGTCTCTT TGGAGGGGCT
  A
  GTCTGGGGAA ACTCCTGCAG GCTGT                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss145123119	ENSMUSSNP4248357	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss322699453	CHEV_8_72802091	CHEVERUD	SCREENING_POP	f	SNP			A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs46636222					SNP	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:70730842 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20447	CpG island 20447	144 bp proximal
Gm38427	predicted gene, 38427	within coordinates
Rr177422	regulatory region 177422	1442 bp distal
Rr177423	regulatory region 177423	1959 bp proximal
Rr186738	regulatory region 186738	within coordinates
Tssr2595	transcription start site region 2595	106 bp downstream
Tssr77724	transcription start site region 77724	79 bp downstream