rs46637457 SNP Detail

Summary

• ID
  rs46637457
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:98944537 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTACTGGCT GAGCCATTTC
  TCCAGCCCAC CCCCCCTTTT TTTTTCTTAA AGAGACAGAG TGTGGCTATC TATGTCCTAG
  ATAAGTGTAG GACAGAGTGA ATTCACCCAG CGAGTGAACA TTCTTTTTTT TTTTTTAAAG
  ATTTATTTAT TGATTATATG TAAGTACACT GTAGCTGTCT TCAGACACTC CAGAAGAGGG
  C
  GTCAGATCTC CTTACGGATG GTTGTGAGCC ACCATGTGGT TGCTGGGATT TGAACTCCGG
  ACCTTCGGAA GAGCAGTCGG GTGCTCTTAC CCACTGAGCC ATCTCACCAG CCCGTGAGTG
  AACATTCTAA CCCACTGAGC CAGCTGTCCG CTGCTGAGAC CTATCTGAGA AAATCAAGTT
  TTGGCCTGCT GGTTCCAATG                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss148463802	ENSMUSSNP2905051	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs46637457					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:98944537 () rs orientation: forward

Symbol	Name	Function Class
D15Jcs28	DNA segment, Chr 15, John C. Schimenti 28	1168 bp proximal
Gm41399	predicted gene, 41399	within coordinates
Rr311358	regulatory region 311358	433 bp proximal