rs46637862 SNP Detail

Summary

• ID
  rs46637862
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:25278077 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTGCCTACG TTCCTGGGAG TTGAGATCTG ATGGACTCAG
  GCTACCTTAC CGCATCGGGT AAGCTCACCT CAGATGATCT CATCGACATC ATTGCTTTTG
  R
  CTTCTTTTAA GTCCGTTCTG ATCCACACGG GCGGCTTTGT TCAAGGGGGA AAGACATTTG
  GTACACATGT GACGGCTTGA ATATATGTGG GGCTCTCCA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss146282451	ENSMUSSNP7227359	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss325779927	CHEV_19_25375203	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs46637862					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:25278077 () rs orientation: forward

Symbol	Name	Function Class
Kank1	KN motif and ankyrin repeat domains 1	within coordinates
Rr364353	regulatory region 364353	within coordinates
Tssr155675	transcription start site region 155675	131 bp downstream
Tssr155676	transcription start site region 155676	121 bp downstream