rs46642200 SNP Detail

Summary

• ID
  rs46642200
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:32912944 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTCACAGAA CACAAAAAAT
  TTTAATGAAG AATGCACATG GTCACTAATT TTGGCTTTAT TTAATGGCAC CTCTTTTCTG
  GCCCCTTTTT AACATTAGAT TTAAGCTTTC AGAAGCAAAG CAGAATAAAA TATACCCAGC
  TGACTGATAA CTGCATATCA AAATATTTTA TTTGTCATGG TTATGGCCAA ACCCAGTCAG
  R
  TAAAGATATT AATAAAACAG TACTCCTTTC TACAGGATTC AGGAATGTGT GATTTCCTCT
  GAATTAGAGT ACAACAGACT TTCTCCATAA CTAGTAAATC TCCTAGGATG TTACCTGTGA
  GGGCTGATGT CCTTCCTCCT TTGACAATTA TCCTTTCATC TAGTGCACGG TTGGACCATA
  CATTTTCCTC AGCCTGTGGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss148850688	ENSMUSSNP5784307	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs46642200					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:32912944 () rs orientation: forward

Symbol	Name	Function Class
2310045N14Rik	RIKEN cDNA 2310045N14 gene	1989 bp upstream
Mylk4	myosin light chain kinase family, member 4	within coordinates