rs46644244 SNP Detail

Summary

• ID
  rs46644244
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:110767806 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATGC CCTCTTCTGG TGTGTCTGAA
  T
  ACAGCTACAG TGTACTCATA CATAA                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss136960302	ENSMUSSNP4545542	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs46644244					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:110767806 () rs orientation: forward

Symbol	Name	Function Class
Cripto	cripto, EGF-CFC family member	870 bp downstream
Rr192786	regulatory region 192786	1006 bp distal
Rr192787	regulatory region 192787	6 bp distal
Rr202610	regulatory region 202610	1039 bp distal
Rr207413	regulatory region 207413	806 bp distal