rs46646383 SNP Detail

Summary

• ID
  rs46646383
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:83078033 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGTTGTGTG TGTGCCAACT
  GCTTAGGTTG CCAGTCCTAT TTTGAGAGTA TTTTTCTGTT TCCTGAATGT AGAGACACTT
  CAGTTCATGT AACAGCCCCA CAAAGTGGTC TTCTGTGACA TGTCCCGGCA GCCATCCTGT
  TTGACTAAAC TCATTGTTGC CTCCATTAAA AGACTTTCCC AGCTTCCCTC AAAGCAATGA
  R
  TGATCTACTA TGACCTGACC AGAGATGCGT GGTAATTTTC TCCTGTTGCT GCTGTAGCAA
  TCTGTCACGA ACTTCAAACA ATAGGAATTT ATCAGACATT TCTGGAGGGC AGAGTCTGGC
  TGCATCTCCA GATCTGGTCT TCTGTCTTCA GGTTTTGTGA CTCTGCTGTC TGCCTCCCTC
  CCAGTCTGTT GGAAAGACTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61658599	NES17605909	PERLEGEN	MM_PANEL2	f	SNP	A		A	A	A	A	A	G	A	A	A	A		A	A	G	A
ss137926456	ENSMUSSNP981560	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A										G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs46646383					SNP	A	A	A	A	A	A	A	G	A	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61658599	NES17605909	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:83078033 () rs orientation: forward

Symbol	Name	Function Class
Rgs6	regulator of G-protein signaling 6	within coordinates
Rr261712	regulatory region 261712	1768 bp proximal
Rr268571	regulatory region 268571	33 bp distal