rs46650743 SNP Detail

Summary

• ID
  rs46650743
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:95183679 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACACACACA CACACACACA
  CACACACAGA GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA CCCTGTCTTG
  AAAAGCAACA AAACAAAAAC AGCACTTGTT CTTGCAGAGG ACTCTAGTTT GGTTTCCAAC
  ATCTACAGAG TGGCTCAAAA CCATCCCCTA ACATCTATTT CAGAGGATCT GACACCTTCT
  W
  TCTTTTGAGA GCAACAGGCA TGCATGTGAT GTCCGTATAT ACAGACAAGA AAAATACTCA
  TACACATAAA AAAATAGGTC TAAAAAAATT TGGTTTTAGA GAAAAAGGAA GACCATTAGT
  TGAAATAATA TATCCTGAAG TGTCTGTCTG TCTGTCTGAT GGCCTGGAAG GCAGGCAAGA
  AGAGGGTTTA GGGGGGAAAA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135510443	ENSMUSSNP4813726	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46650743					SNP	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95183679 () rs orientation: forward

Symbol	Name	Function Class
Prune1	prune exopolyphosphatase	Intron
Rr580883	regulatory region 580883	1704 bp distal
Rr580884	regulatory region 580884	589 bp proximal