rs46672484 SNP Detail

Summary

• ID
  rs46672484
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:157397909 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTGAGACAG CATTAACTGG CAGGTTTGGT TTTTCCCCTG
  TTCCTCAGTG GGGTACAAGC TCAGAGGGAG GATAAATTAG TGAAGGAAAA TAAAGCCATG
  R
  TTTCCTTGTG AAACTGAGTC ATAAGTGCAA ATTTGAGATT CATTCACACA CACACACACA
  CACACACACA CACAAACACA CACACACACA CACACACAT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss145824215	ENSMUSSNP7156100	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs46672484					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:157397909 () rs orientation: forward

Symbol	Name	Function Class
Rr421413	regulatory region 421413	455 bp distal
Sec16b	SEC16 homolog B, endoplasmic reticulum export factor	1914 bp downstream