rs46672931 SNP Detail

Summary

• ID
  rs46672931
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:85342270 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G GGAGCCACTT TGTGGTTGCT AGGATTTGAA CTCAGGATCA
  TCTCTCCAGC CCCACCCACA GTCTGCTTTT AAATCTTACT GCTCACACCT TGAACCAGAC
  M
  AGTGCTCGTT TACAGCACTT GGCAGCTGCT TCCTCTCCAC TTTCCCTGTC CTTCCATCAG
  CTTCCGCTTG TAGGCAAGGC TGGTTCCTTA ATGTAAAAAG C                    
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	MSM/Ms
ss146149188	ENSMUSSNP7236428	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	MSM/Ms
rs46672931					SNP	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:85342270 () rs orientation: forward

Symbol	Name	Function Class
Rr343448	regulatory region 343448	270 bp distal
Slc3a1	solute carrier family 3, member 1	within coordinates
Tssr146077	transcription start site region 146077	1207 bp downstream