rs46680331 SNP Detail

Summary

• ID
  rs46680331
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:16805264 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A AGGGAACTGC AACCCTATAG GTGGAACAAC AATATGAACT
  AACCAGTACC CCCTGCAGCT CGTGTCTCTA GCTGCATATG TATCAGAAGA TGGCCTGGTC
  R
  GCCATCAGTG GAAAGAGAGG CCCATTGGTC GTGCAGATTT TATATGCCTC AGTACAGGGG
  AATGCCAGGG CCAAGAAGTG GGAGTGGGAG GAAGGGAGGA G                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146485687	ENSMUSSNP6986608	ENSEMBL	ENSEMBL_Sanger	r	SNP	T	T	T
ss148196689	ENSMUSSNP4125813	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46680331					SNP	?	?	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:16805264 () rs orientation: forward

Symbol	Name	Function Class
Rr370925	regulatory region 370925	1584 bp upstream